The majority of my research uses the opensource R software environment. R code developed by me or in collaboration with others for various research projects can be found on my GitHub (mainly more recent projects) or associated with relevant papers.
CMRnet I have developed an R package to construct, plot and analyse social and movement networks from capture-mar-recapture data.
The package is designed to work with any spatially and temporally referenced capture data. Individuals that are captured at the same (or nearby) location within a set time interval and considered are linked by edges in the social networks generated, while an individual subsequently being captured in a different location constitutes a directed edge in the movement network.
There is also functionality to plot and conduct permutations of the networks generated included in the current set of functions. The outputs of the network generation functions can additionally be converted into igraph objects for onward analysis.
More details on how to use the package as well as some examples demonstrating its use can be found here.